SRV_MM-int (DF0004115)

ERV2 Endogenous Retrovirus from mouse.

Description

Consensus is 70-75% identical at DNA level to Simian retroviruses 1&2, only missing the ENV gene. ORFs: gag 154-1968, pro 1794-2729, pol 2687-5365. Very few copies contain the region 2600-4200.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVK Article

Hit Statistics

The model is 6139 positions long. The average length of non-redundant hits to the model is 612.7. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 164 11679 101 8638

External Database Links

  • Repbase : SRV_MM-int [Requires Repbase registration]