BHIKHARI-5-I_DR (DF0004083)

LTR retrotransposon from zebrafish: internal sequence

Description

Bhikhari ORF translation products have an ATPase domain (AA 100-200), resembling the conserved domain SMC as found in COG1196, pfam02463, and COG3264.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Undefined

Hit Statistics

The model is 9658 positions long. The average length of non-redundant hits to the model is 1958.7. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 399 589 389 556

External Database Links