Gypsy102-I_DR (DF0004073)

LTR retrotransposon from zebrafish: internal sequence

Description

Positions [2835-3374] - Reverse transcriptase. Positions [4827-5303] - Integrase core. 'TAAA' target site duplication. LTRs are 99% similar to each other.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 6485 positions long. The average length of non-redundant hits to the model is 3841.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 16 1262 14 922

External Database Links