Non-autonomous DNA transposon from zebrafish
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16-bp terminal inverted repeats. TTAA target site duplications. Almost 6,000 matches in the genome. Pos 1-650 and 1023-1234 (end) match the beginning and end of the autonomous Kolobok-4_DR element by about 80% and the element appears to be misnamed.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 1234 positions long. The average length of non-redundant hits to the model is 913.1. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : LOOPERN1_DR [Requires Repbase registration]