Non-autonomous hAT DNA transposon from zebrafish
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8-bp target site duplications and 21-bp terminal inverted repeats. 9,600 copies in genome. Copies are ~8% diverged from consensus. There are still undescribed related elements and a copy is present within the composite EnSpm-6N1_DR element. The hAT classification is only based on the 8-bp target site duplications.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 427 positions long. The average length of non-redundant hits to the model is 309.8. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : HATN1_DR [Requires Repbase registration]