TDR19 (DF0004032)

Non-autonomous DNA transposon from zebrafish

Description

8-bp target site duplication. Over 8000 copies in the genome. Terminal similarities to many Charlie transposons.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 392 positions long. The average length of non-redundant hits to the model is 144.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 4885 118676 3873 99153

External Database Links

  • Repbase : TDR19 [Requires Repbase registration]