Gypsy62-I_DR (DF0003961)

LTR retrotransposon from zebrafish: internal sequence

Description

Positions [1667-2122] - Reverse transcriptase. Positions [3140-3619] - Integrase core. 'GGTAG' target site duplication. LTRs are 99% similar to each other.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 4293 positions long. The average length of non-redundant hits to the model is 638.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 55 5079 44 3764

External Database Links