Polinton-1N1_DR (DF0003860)

Non-autonomous Maverick/Polinton DNA transposon from zebrafish

Description

This nonautonomous transposon is characterized by ~7.3-kb-bp terminal inverted repeats and 6-bp target site duplications. The consensus sequence was built based on multiple alignment of several copies that are >90% identical to each other. This nonautonomous family was derived from the autonomous Polinton-1_DR.

References

  1. Self-synthesizing DNA transposons in eukaryotes.
    Kapitonov VV, Jurka J;
    Proc Natl Acad Sci U S A 2006;103:4540-4545. Pubmed

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily Maverick

Hit Statistics

The model is 15469 positions long. The average length of non-redundant hits to the model is 390.2. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 2228 304047 174 501

External Database Links