hAT-4_DR (DF0003817)

Autonomous hAT DNA transposon from zebrafish

Description

hAT-4_DR is a young family of autonomous DNA transposons that belongs to the hAT superfamily. The genome harbors several copies of hAT-4_DR that are over 95% identical to each other. DNA8-9_DR is a nonautonomous transposon derived from hAT-4_DR. The consensus sequence encodes a 642-aa transposase (putatively by three exons).

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Ac

Hit Statistics

The model is 3176 positions long. The average length of non-redundant hits to the model is 551.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 269 1870 264 1844

External Database Links

  • Repbase : hAT-4_DR [Requires Repbase registration]