Autonomous hAT DNA transposon from zebrafish
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hAT-4_DR is a young family of autonomous DNA transposons that belongs to the hAT superfamily. The genome harbors several copies of hAT-4_DR that are over 95% identical to each other. DNA8-9_DR is a nonautonomous transposon derived from hAT-4_DR. The consensus sequence encodes a 642-aa transposase (putatively by three exons).
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 3176 positions long. The average length of non-redundant hits to the model is 551.8. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : hAT-4_DR [Requires Repbase registration]