ERV1-1-I_DR (DF0003808)

LTR retrotransposon from zebrafish: internal sequence

Description

Positions [4563-4997] - Reverse transcriptase. Positions [6675-7151] - Integrase core. 'CTAT' target site duplication. LTRs are 99% similar to each other.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 9909 positions long. The average length of non-redundant hits to the model is 1326.2. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 58 1461 32 1029

External Database Links

  • Repbase : ERV1-1-I_DR [Requires Repbase registration]