hAT-N19_DR (DF0003803)

Non-autonomous hAT DNA transposon from zebrafish

Description

hAT-N19_DR is a family of nonautonomous DNA transposons that belongs to the hAT superfamily. The genome harbors over one hundred copies of hAT-N19_DR that are ~94% identical to their consensus sequence. This transposable element is characterized by 8-bp target site duplications and 15-bp terminal inverted repeats.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 660 positions long. The average length of non-redundant hits to the model is 330.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 419 3438 364 2442

External Database Links

  • Repbase : hAT-N19_DR [Requires Repbase registration]