Gypsy139-I_DR (DF0003802)

LTR retrotransposon from zebrafish: internal sequence

Description

Positions [2937-3359] - Reverse transcriptase. Positions [1833-2309] - Integrase core. 'GTAAC' target site duplication. LTRs are 99% similar to each other.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 4231 positions long. The average length of non-redundant hits to the model is 714.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 118 4175 96 2240

External Database Links