Gypsy117-I_DR (DF0003790)

LTR retrotransposon from zebrafish: internal sequence


Positions [2862-3401] - Reverse transcriptase. Positions [4857-5333] - Integrase core. 'TATG' target site duplication. LTRs are 99% similar to each other.


Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 6564 positions long. The average length of non-redundant hits to the model is 4233.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 8 1127 7 852

External Database Links