Copia-8-LTR_DR (DF0003772)

LTR retrotransposon from zebrafish: long terminal repeat

Description

Presumed matches to Copia probably were based on low complexity DNA. The internal sequence encodes a Gypsy type gag. The element is non-autonomous of course.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy? Article

Note: Uncertain classification.

Hit Statistics

The model is 484 positions long. The average length of non-redundant hits to the model is 418.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 651 14286 607 10613

External Database Links