TDR25 (DF0003759)

Non-autonomous DNA transposon from zebrafish

Description

The TIRs are imperfect and may include TSDs. Removed TSDs and reverse complemented the sequence to match the orientation of related Charlie elements.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 611 positions long. The average length of non-redundant hits to the model is 375.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 3542 9228 3448 8470

External Database Links

  • Repbase : TDR25 [Requires Repbase registration]