EnSpm1_DR (DF0003681)

Autonomous En/Spm DNA transposon from zebrafish

Description

This is a degraded copy of En/Spm DNA transposon related to the EnSpmN1_DR nonautonomous element. The transposase coding region (pos 127-2790) is interrupted by two frameshifts and two stopcodons. The zebrafish genome harbors several diverged families of autonomous En/Spm transposons.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily CMC-EnSpm

Hit Statistics

The model is 4402 positions long. The average length of non-redundant hits to the model is 333.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 110 1648 96 1490

External Database Links

  • Repbase : EnSpm1_DR [Requires Repbase registration]