Autonomous En/Spm DNA transposon from zebrafish
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This is a degraded copy of En/Spm DNA transposon related to the EnSpmN1_DR nonautonomous element. The transposase coding region (pos 127-2790) is interrupted by two frameshifts and two stopcodons. The zebrafish genome harbors several diverged families of autonomous En/Spm transposons.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 4402 positions long. The average length of non-redundant hits to the model is 333.3. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : EnSpm1_DR [Requires Repbase registration]