Gypsy57-I_DR (DF0003667)

LTR retrotransposon from zebrafish: internal sequence


Positions [2489-3028] - Reverse transcriptase. Positions [4344-4724] - Integrase core. 'CTAA' target site duplication. LTRs are 99% similar to each other.


Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 5789 positions long. The average length of non-redundant hits to the model is 1378.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 11 2511 7 1866

External Database Links