EnSpm-N6_DR (DF0003662)
Non-autonomous En/Spm DNA transposon from zebrafish
Description
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
Copies are ~94% identical to the consensus, which is a palindrome. The TSD is 2 bp long. The 11-bp terminus of EnSpm-N6_DR is 80% identical to the EnSpm-6_DR terminus.
Classification
| Accession | Name | Wikipedia |
|---|---|---|
| Type | DNA Transposon | Article |
| Class | Cut and Paste | |
| Superfamily | CMC-EnSpm? |
Note: Uncertain classification.
Hit Statistics
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 346 positions long. The average length of non-redundant hits to the model is 227.1. This table shows the number of hits above score thresholds:
| Species | Gathering | Trusted | ||
|---|---|---|---|---|
| non-redundant | all hits | non-redundant | all hits | |
| Danio rerio | 3194 | 9148 | 3020 | 8367 |
External Database Links
- Repbase : EnSpm-N6_DR [Requires Repbase registration]