TDR5 (DF0003656)

Non-autonomous DNA transposon from zebrafish

Description

Contains 13 bp TIRs. The 5'-end is simiar to that of EnSpm-14_HM, therefore this element is classified as EnSpm element. Termini similar to those of EnSpm-N7_DR and EnSpm-2N1_HM

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily CMC-EnSpm

Hit Statistics

The model is 531 positions long. The average length of non-redundant hits to the model is 332.4. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 5535 18450 5340 13457

External Database Links

  • Repbase : TDR5 [Requires Repbase registration]