Copia5-I_DR (DF0003649)

LTR retrotransposon from zebrafish: internal sequence

Description

5 bp target site duplication. LTRs are 100% similar to each other. The closest elements to this family are from fungi and plants.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Copia

Hit Statistics

The model is 4425 positions long. The average length of non-redundant hits to the model is 1783.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 29 48 28 41

External Database Links

  • Repbase : Copia5-I_DR [Requires Repbase registration]