hAT-N21_DR (DF0003586)

Non-autonomous hAT DNA transposon from zebrafish

Description

The consensus was built from dozens of 2-3% divergent copies. 8-bp TSDs, 16-bp TIRS. The terrmini match those of multiple Charlie hAT transposons.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 1846 positions long. The average length of non-redundant hits to the model is 570.4. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 3039 129361 2206 81936

External Database Links

  • Repbase : hAT-N21_DR [Requires Repbase registration]