Helitron-N1_DR (DF0003585)

Non-autonomous Helitron from zebrafish


This transposon is usually inserted into A|TT target sites (no TSDs). Subterminal TIRs: pos. 3-15 and 2550-2538; a palindrome at pos. 2552-2571. The Helitron-N1_DR consensus sequence is 76% identical to the consensus sequence of the Helitron-N2_XT from the frog genome. Therefore, horizontal transfer was involved in evolution of these transposons.


Accession Name Wikipedia
Type DNA Transposon Article
Class Rolling Circle
Superfamily Helitron Article

Hit Statistics

The model is 2581 positions long. The average length of non-redundant hits to the model is 676.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 3506 9757 2706 7705

External Database Links