hAT-2_DR (DF0003580)

Autonomous hAT DNA transposon from zebrafish


hAT-2_DR is an autonomous DNA transposon. This transposon is characterized by the 8-bp target site duplications and 16-bp terminal inverted repeats. The consensus encodes a 611-aa hAT transposase (pos. 255-2087). The genome contains about 1000 copies of hAT-2_DR nonautonomous elements that are ~97% identical to the consensus. Nearly all these copies are nonautonomous elements. The transposase-encoding elements are present just in 2 copies.


Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 2536 positions long. The average length of non-redundant hits to the model is 432.4. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 408 3006 369 1683

External Database Links

  • Repbase : hAT-2_DR [Requires Repbase registration]