Non-autonomous DNA transposon from zebrafish
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DNA-8-1_DR is a nonautonomous DNA transposon. It is characterized by 16-bp terminal inverted repeats and 8-bp target site duplications. The termini are similar to tjpse of hAT-N79_DR. DNA-8-1_DR is a composite transposon, as it contains a copy of TDR4 transposon (pos. 910-1142). DNA-8-1_DR elements are ~95% identical to their consensus sequences.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 1332 positions long. The average length of non-redundant hits to the model is 592.3. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : DNA-8-1_DR [Requires Repbase registration]