DNA-X-12_DR (DF0003510)

Non-autonomous DNA transposon from zebrafish

Description

The full-length of this element is ~27-kb before masking out other TEs. It seems to insert into GT/CA satellite. TIR is ~17 bp. The TSD length is unknown. Fragmental similarities to Activator transposases (pos 10879-11238, 14248-14015 (reverse), but these may represent insertions into this huge element.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily Undefined

Hit Statistics

The model is 16684 positions long. The average length of non-redundant hits to the model is 377.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 1990 208953 1508 185242

External Database Links

  • Repbase : DNA-X-12_DR [Requires Repbase registration]