Non-autonomous DNA transposon from zebrafish
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
The full-length of this element is ~27-kb before masking out other TEs. It seems to insert into GT/CA satellite. TIR is ~17 bp. The TSD length is unknown. Fragmental similarities to Activator transposases (pos 10879-11238, 14248-14015 (reverse), but these may represent insertions into this huge element.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 16684 positions long. The average length of non-redundant hits to the model is 377.1. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : DNA-X-12_DR [Requires Repbase registration]