DNA2-1_DR (DF0003435)

Non-autonomous DNA transposon from zebrafish

Description

DNA2-1_DR is a nonautonomous DNA transposon. It is characterized by 11-bp terminal inverted repeats and 2-bp target site duplications. This is a composite transposon, it contains copies of HE1_DR1 (pos. 4138-5096) and HAT1N_DR (pos. 4138-5096). The beginning matches EnSpm-3_DR and the original entry has been reverse complemented to match.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily CMC-EnSpm?

Note: Uncertain classification.

Hit Statistics

The model is 5547 positions long. The average length of non-redundant hits to the model is 487.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 1441 208902 1225 181924

External Database Links

  • Repbase : DNA2-1_DR [Requires Repbase registration]