Non-autonomous DNA transposon from zebrafish
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DNA2-1_DR is a nonautonomous DNA transposon. It is characterized by 11-bp terminal inverted repeats and 2-bp target site duplications. This is a composite transposon, it contains copies of HE1_DR1 (pos. 4138-5096) and HAT1N_DR (pos. 4138-5096). The beginning matches EnSpm-3_DR and the original entry has been reverse complemented to match.
|Class||Cut and Paste|
Note: Uncertain classification.
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 5547 positions long. The average length of non-redundant hits to the model is 487.5. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : DNA2-1_DR [Requires Repbase registration]