DNA-TA-2_DR (DF0003371)

DNA transposon from zebrafish

Description

The TSD is mostly TA dinucleotide. This consensus is characterized by ~65 bp TIR (mismatch from 12-30). The termini are related to those of EnSpm-N16_DR and EnSpm-N10_DR.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily CMC-EnSpm

Hit Statistics

The model is 196 positions long. The average length of non-redundant hits to the model is 162.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 1680 17386 1538 14591

External Database Links

  • Repbase : DNA-TA-2_DR [Requires Repbase registration]