Gypsy140-I_DR (DF0003326)

LTR retrotransposon from zebrafish: internal sequence

Description

Positions [3034-3573] - Reverse transcriptase. Positions [5050-5526] - Integrase core. 'CAAG' target site duplication. LTRs are 99% similar to each other.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 6908 positions long. The average length of non-redundant hits to the model is 1529.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 13 1271 4 844

External Database Links