Non-autonomous DNA transposon from zebrafish
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
This element is characterized by 15-bp terminal inverted repeats and TA targets site duplications. There are ~3000 copies of DNA15TA1_DR present in the zebrafish genome; they are ~91% identical with the consensus sequence. Closely related to DNA-2-33_DR. End similar to those of EnSpm-N2_DR and EnSpm-N14_DR.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 442 positions long. The average length of non-redundant hits to the model is 324.1. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : DNA15TA1_DR [Requires Repbase registration]