DNA15TA1_DR (DF0003270)

Non-autonomous DNA transposon from zebrafish

Description

This element is characterized by 15-bp terminal inverted repeats and TA targets site duplications. There are ~3000 copies of DNA15TA1_DR present in the zebrafish genome; they are ~91% identical with the consensus sequence. Closely related to DNA-2-33_DR. End similar to those of EnSpm-N2_DR and EnSpm-N14_DR.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily CMC-EnSpm

Hit Statistics

The model is 442 positions long. The average length of non-redundant hits to the model is 324.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 4885 7974 4713 6955

External Database Links

  • Repbase : DNA15TA1_DR [Requires Repbase registration]