Non-autonomous Harbinger DNA transposon from zebrafish
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A nonautonomous derivative of the HARBINGER1_DR DNA transposon. HARBINGERN1_DR copies are flanked by 3-bp target site duplications (TAA) generated upon their integration in the genome. There are many subfamilies of HARBINGERN1_DR-like elements present in the genome.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 650 positions long. The average length of non-redundant hits to the model is 387.2. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : HARBINGERN1_DR [Requires Repbase registration]