Chaplin1_DR (DF0003203)

Autonomous hAT DNA transposon from zebrafish

Description

Renamed from hAT-3_DR for the very close similarity (85%) to Chaplin1_FR in the fugu genome. The genome harbors only one copy of Chaplin1_DR and several hundred copies of the nonautonomous derivatives Chaplin1A_DR and Chaplin1B_DR.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily Unknown

Hit Statistics

The model is 2920 positions long. The average length of non-redundant hits to the model is 116.9. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 496 2846 363 1467

External Database Links

  • Repbase : hAT-3_DR [Requires Repbase registration]