BHIKHARI-4-I_DR (DF0003181)

Internal sequence of a Bikhari LTR retrotransposon from zebrafish

Description

TSD is 4 bp long. ORF 2443-4044. Bhikhari ORF translation products have an ATPase domain (AA 100-200), resembling the conserved domain SMC as found in COG1196, pfam02463, and COG3264.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Undefined

Hit Statistics

The model is 4940 positions long. The average length of non-redundant hits to the model is 1178.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 26 176 26 176

External Database Links