DNA25TWA2_DR (DF0003121)

Non-autonomous DNA transposon from zebrafish

Description

~2000 copies of DNA25TWA2_DR are expected to populate the complete zebrafish genome. They are ~3% divergent from the consensus sequence. This element is characterized by 25-bp terminal inverted repeats and the TWA targets site duplications. Its classification is not certain yet, although it is expected to be a member of the Harbinger/IS5 or Mariner/Tc1 superfamilies.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily Undefined

Hit Statistics

The model is 802 positions long. The average length of non-redundant hits to the model is 484.7. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 4250 9538 3963 6394

External Database Links