ERV1-N6-I_DR (DF0003111)

Internal sequence of a non-autonomous endogenous retrovirus from zebrafish

Description

The gag protein encoded by ORF 873-2495 is clearly, but distantly related to gags from Gypsies, ERV1s, Lenti viruses, etc. Pos 1-1467 and 4283-4503 (end) quite similar to ERV1-7_DR-I, so classified as an ERV1 element.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 4503 positions long. The average length of non-redundant hits to the model is 1523.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 28 34 28 34

External Database Links