Copia-9-LTR_DR (DF0003046)

LTR retrotransposon from zebrafish: long terminal repeat

Description

Solo LTR from Copia retrotransposon. Similar to Copia2-LTR_DR, which is tentatively assigned to be a possible Gypsy element (maybe).

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy? Article

Note: Uncertain classification.

Hit Statistics

The model is 946 positions long. The average length of non-redundant hits to the model is 468.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 137 421 129 324

External Database Links