LTR retrotransposon from zebrafish: long terminal repeat
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Solo LTR from Copia retrotransposon. Similar to Copia2-LTR_DR, which is tentatively assigned to be a possible Gypsy element (maybe).
Note: Uncertain classification.
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 946 positions long. The average length of non-redundant hits to the model is 468.3. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : Copia-9-LTR_DR [Requires Repbase registration]