HATN4_DR (DF0003034)

Non-autonomous hAT DNA transposon from zebrafish

Description

2700 copies in the zebrafish genome, 9% diverged from consensus. 75-bp terminal inverted repeats and 8-bp target site duplications. Termini match those of many Charlie hAT transposons.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 192 positions long. The average length of non-redundant hits to the model is 157.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 2069 90819 1691 66848

External Database Links

  • Repbase : HATN4_DR [Requires Repbase registration]