Gypsy144-I_DR (DF0003023)

LTR retrotransposon from zebrafish: internal sequence

Description

Positions [3121-3624] - Reverse transcriptase. Positions [5015-5488] - Integrase core. 'ATTT' target site duplication. LTRs are 99% similar to each other.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 6642 positions long. The average length of non-redundant hits to the model is 1953.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 12 2840 11 1684

External Database Links