Mariner-N3_DR (DF0002963)

Non-autonomous En/Spm DNA transposon from zebrafish

Description

2-bp TSD, mostly TA, but other dinucleotides can also be found. 98% identical to consensus. Termini similar to those of Tc1N1_DR, DNA-2-12_DR, and DNA-2-22_DR. Though duplicating TA, these elements have TIRs similar to ENS1_Cis, which seems an autonomous En-Spm1 element (also with TA TSDs)

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily CMC-EnSpm?

Note: Uncertain classification.

Hit Statistics

The model is 5507 positions long. The average length of non-redundant hits to the model is 810.4. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 1219 89885 860 59222

External Database Links