Copia2-LTR_DR (DF0002885)

LTR retrotransposon from zebrafish: long terminal repeat

Description

No coding capacity. Pos 723-1298 is a microsatellite matching that in Copia-6-I_DR, which shows similarities to (tentative) Gypsy elements.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy? Article

Note: Uncertain classification.

Hit Statistics

The model is 1150 positions long. The average length of non-redundant hits to the model is 356.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 167 1496 97 284

External Database Links