Non-autonomous hAT DNA transposon from zebrafish
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1900 copies in the genome, about 8% diverged from consensus. Imperfect 14-bp terminal inverted repeats and an 8-bp target site duplications. Termini similar to that of the autonomous hAT-10_DR element.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 571 positions long. The average length of non-redundant hits to the model is 452.7. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : HATN3_DR [Requires Repbase registration]