DNA-TA-1_DR (DF0002863)

Non-autonomous DNA transposon from zebrafish

Description

The consensus was built from copies which are 80-90% identical to the consensus sequences. TSD 2 bp (mostly TA dinucleotide). TIR is 11 bp long. The 5' 180 bp is 88% identical to the corresponding region of DNA11TA1_DR, while the final 182 bp match those of EnSpm-10_DR.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily CMC-EnSpm

Hit Statistics

The model is 812 positions long. The average length of non-redundant hits to the model is 318.2. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 1173 28286 1041 24472

External Database Links

  • Repbase : DNA-TA-1_DR [Requires Repbase registration]