Gypsy136-I_DR (DF0002797)

LTR retrotransposon from zebrafish: internal sequence

Description

Positions [2837-3376] - Reverse transcriptase. Positions [4853-5329] - Integrase core. 'CTTG' target site duplication. LTRs are 99% similar to each other.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 6588 positions long. The average length of non-redundant hits to the model is 4614.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 10 1137 10 866

External Database Links