Non-autonomous Kolobok transposon from zebrafish
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TSD is TTAA specific. The termini 5'-AG is sheared with other autonomous Kolobok elements and pos 1889-2167 are similar to Kolobok-1_DR 5033-5292.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 3002 positions long. The average length of non-redundant hits to the model is 336.6. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : Kolobok-N4_DR [Requires Repbase registration]