Gypsy141-I_DR (DF0002740)

LTR retrotransposon from zebrafish: internal sequence

Description

Positions [1423-2001] - Reverse transcriptase. Positions [3064-3570] - Integrase core. 'CCAGC' target site duplication. LTRs are 100% similar to each other.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 4223 positions long. The average length of non-redundant hits to the model is 2231. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 10 316 9 217

External Database Links