Gypsy116-I_DR (DF0002722)

LTR retrotransposon from zebrafish: internal sequence

Description

Positions [3479-3904] - Reverse transcriptase. Positions [5436-5912] - Integrase core. 'CAAA' target site duplication. LTRs are 98% similar to each other.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 7004 positions long. The average length of non-redundant hits to the model is 4064.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 12 1082 11 820

External Database Links