Gypsy101-I_DR (DF0002704)

LTR retrotransposon from zebrafish: internal sequence

Description

Positions [1673-2014] - Reverse transcriptase. Positions [3146-3625] - Integrase core. 'ATGAT' target site duplication. LTRs are 99% similar to each other.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 4305 positions long. The average length of non-redundant hits to the model is 3571.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 111 3696 104 2551

External Database Links