BHIKHARI-3-I_DR (DF0002549)

Internal sequence of a Bikhari LTR retrotransposon from zebrafish


TSD is 4 bp long. ORF 614-2320. Bhikhari ORF tranlsation products have an ATPase domain (AA 100-200), resembling the conserved domain SMC as found in COG1196, pfam02463, and COG3264.


Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Undefined

Hit Statistics

The model is 3361 positions long. The average length of non-redundant hits to the model is 1588.9. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 13 20 13 19

External Database Links