Dada-tL_DR (DF0002449)
Dada-type DNA transposon from zebrafish
Description
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
Exon-intron structure is predicted by FGENESH. Messy affair. Pos 1970-2344 is a TDR18 fragment that also appears in diverse elements like Helitron-N3_DR, ENSPM-6_DR, hAT-N53_DR and the satellite TE-X-5_DR. Pos 3557-3810 is also present as pos 1-254 of CR1-42_DR .
Classification
| Accession | Name | Wikipedia |
|---|---|---|
| Type | DNA Transposon | Article |
| Class | Cut and Paste | |
| Superfamily | Dada |
Hit Statistics
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 10407 positions long. The average length of non-redundant hits to the model is 412.7. This table shows the number of hits above score thresholds:
| Species | Gathering | Trusted | ||
|---|---|---|---|---|
| non-redundant | all hits | non-redundant | all hits | |
| Danio rerio | 2243 | 106998 | 1280 | 74837 |
External Database Links
- Repbase : Dada-tL_DR [Requires Repbase registration]