Nimb-1_DR (DF0002415)

I-like non-LTR retrotransposon from zebrafish

Description

Only 9 sequences in the zebrafish genome are >97% identical to consensus. The 3' termini are composed by (GAA)n microsatellite.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily I

Hit Statistics

The model is 5274 positions long. The average length of non-redundant hits to the model is 388.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 210 2846 119 1482

External Database Links

  • Repbase : Nimb-1_DR [Requires Repbase registration]