DNA-2-1_DR (DF0002397)

DNA transposon from zebrafish

Description

The TSD is 2 bp, mostly TA. The TIR is ~30 bp long.The 5'-CACT terminus suggests that this family belongs to the EnSpm superfamily; 2-bp TSDs also occur to EnSpm elements. Related to EnSpm-1_DR. Reverse complemented to match.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily CMC-EnSpm

Hit Statistics

The model is 2550 positions long. The average length of non-redundant hits to the model is 399.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 956 17635 735 12943

External Database Links

  • Repbase : DNA-2-1_DR [Requires Repbase registration]